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PALD1 phosphatase domain containing paladin 1 [ Rana temporaria (common frog) ]

Gene ID: 120947204, updated on 21-Mar-2024

Summary

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Gene symbol
PALD1
Gene description
phosphatase domain containing paladin 1
See related
EnsemblRapid:ENSRTEG00010009638
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PALD1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 8 NC_053496.1 (96356128..96671776)

Chromosome 8 - NC_053496.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene U1 spliceosomal RNA Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 14 Neighboring gene stearoyl-CoA desaturase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053496.1 Chromosome 8 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
paladin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053496.1 Reference aRanTem1.1

    Range
    96356128..96671776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040362326.1 → XP_040218260.1  paladin isoform X2

    Related
    ENSRTEP00010011983.1, ENSRTET00010016205.1
    Conserved Domains (2) summary
    cd17659
    Location:105 → 395
    PTP_paladin_1; protein tyrosine phosphatase-like domain of paladin, repeat 1
    cd17660
    Location:499 → 771
    PTP_paladin_2; protein tyrosine phosphatase-like domain of paladin, repeat 2

  2. XM_040362325.1 → XP_040218259.1  paladin isoform X1

    Conserved Domains (2) summary
    cd17659
    Location:113 → 403
    PTP_paladin_1; protein tyrosine phosphatase-like domain of paladin, repeat 1
    cd17660
    Location:507 → 779
    PTP_paladin_2; protein tyrosine phosphatase-like domain of paladin, repeat 2

  3. XM_040362327.1 → XP_040218261.1  paladin isoform X3

    Related
    ENSRTEP00010011973.1, ENSRTET00010016195.1
    Conserved Domains (2) summary
    cd17659
    Location:113 → 403
    PTP_paladin_1; protein tyrosine phosphatase-like domain of paladin, repeat 1
    cd17660
    Location:497 → 769
    PTP_paladin_2; protein tyrosine phosphatase-like domain of paladin, repeat 2

  4. XM_040362328.1 → XP_040218262.1  paladin isoform X4

    Related
    ENSRTEP00010011970.1, ENSRTET00010016192.1
    Conserved Domains (2) summary
    cd17659
    Location:94 → 384
    PTP_paladin_1; protein tyrosine phosphatase-like domain of paladin, repeat 1
    cd17660
    Location:488 → 760
    PTP_paladin_2; protein tyrosine phosphatase-like domain of paladin, repeat 2
Nucleotide Protein
Heading Accession and Version

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