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PSD pleckstrin and Sec7 domain containing [ Rana temporaria (common frog) ]

Gene ID: 120947217, updated on 21-Mar-2024

Summary

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Gene symbol
PSD
Gene description
pleckstrin and Sec7 domain containing
See related
EnsemblRapid:ENSRTEG00010009565
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PSD in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 8 NC_053496.1 (99516411..99887753)

Chromosome 8 - NC_053496.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 2 Neighboring gene F-box and leucine rich repeat protein 15 Neighboring gene nuclear factor kappa B subunit 2 Neighboring gene transmembrane protein 150A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053496.1 Chromosome 8 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PH and SEC7 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053496.1 Reference aRanTem1.1

    Range
    99516411..99887753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040362362.1 → XP_040218296.1  PH and SEC7 domain-containing protein 1

    Related
    ENSRTEP00010011835.1, ENSRTET00010016057.1
    Conserved Domains (2) summary
    cd00171
    Location:692 → 846
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13295
    Location:886 → 1011
    PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
Nucleotide Protein
Heading Accession and Version

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