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Taf5 TATA-box binding protein associated factor 5 [ Drosophila elegans ]

Gene ID: 121466814, updated on 15-May-2024

Summary

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Gene symbol
Taf5
Gene description
TATA-box binding protein associated factor 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila elegans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Taf5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1815250v1 (GCF_018152505.1) Unplaced Scaffold NW_024545550.1 (6362384..6364712)

NW_024545550.1Genomic Context describing neighboring genes Neighboring gene peroxisomal (S)-2-hydroxy-acid oxidase Neighboring gene peroxisome assembly factor 2 Neighboring gene no child left behind Neighboring gene 5-hydroxyisourate hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024545550 Unplaced Scaffold Reference ASM1815250v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila elegans Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815250v1

Genomic

  1. NW_024545550.1 Reference ASM1815250v1

    Range
    6362384..6364712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041707293.1 → XP_041563227.1  transcription initiation factor TFIID subunit 5

    Conserved Domains (3) summary
    cd08044
    Location:114 → 245
    TAF5_NTD2; TAF5_NTD2 is the second conserved N-terminal region of TATA Binding Protein (TBP) Associated Factor 5 (TAF5), involved in forming Transcription Factor IID (TFIID)
    cd00200
    Location:373 → 646
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:380 → 448
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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