U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zaf1 ZAD and Architectural Function 1 [ Drosophila elegans ]

Gene ID: 121467572, updated on 15-May-2024

Summary

Go to the top of the page Help
Gene symbol
Zaf1
Gene description
ZAD and Architectural Function 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila elegans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Zaf1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1815250v1 (GCF_018152505.1) Unplaced Scaffold NW_024545863.1 (6241966..6243546, complement)

NW_024545863.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein Xfin Neighboring gene microtubule-associated protein Jupiter Neighboring gene zinc finger and SCAN domain-containing protein 12 Neighboring gene zinc finger protein 12 Neighboring gene zinc finger protein 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024545863 Unplaced Scaffold Reference ASM1815250v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein 624

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Drosophila elegans Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815250v1

Genomic

  1. NW_024545863.1 Reference ASM1815250v1

    Range
    6241966..6243546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041709282.1 → XP_041565216.1  zinc finger protein 624

    Conserved Domains (3) summary
    smart00868
    Location:9 → 78
    zf-AD; Zinc-finger associated domain (zf-AD)
    COG5048
    Location:287 → 350
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:263 → 283
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases