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LOC121790136 protein FAR-RED IMPAIRED RESPONSE 1-like [ Salvia splendens ]

Gene ID: 121790136, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121790136
Gene description
protein FAR-RED IMPAIRED RESPONSE 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121790136 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) Unplaced Scaffold NW_024599069.1 (3631..5262, complement)

NW_024599069.1Genomic Context describing neighboring genes Neighboring gene protein SOB FIVE-LIKE 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024599069 Unplaced Scaffold Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAR-RED IMPAIRED RESPONSE 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NW_024599069.1 Reference SspV2 Primary Assembly

    Range
    3631..5262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042188416.1 → XP_042044350.1  protein FAR-RED IMPAIRED RESPONSE 1-like

    Conserved Domains (1) summary
    PLN03097
    Location:1 → 333
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
Nucleotide Protein
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