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LOC121811690 tRNA (guanine(9)-N1)-methyltransferase-like [ Salvia splendens ]

Gene ID: 121811690, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121811690
Gene description
tRNA (guanine(9)-N1)-methyltransferase-like
Locus tag
SASPL_121163
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121811690 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 7 NC_056038.1 (29240079..29243406)

Chromosome 7 - NC_056038.1Genomic Context describing neighboring genes Neighboring gene sister chromatid cohesion protein PDS5 homolog A-like Neighboring gene uncharacterized LOC121810692 Neighboring gene nuclear transcription factor Y subunit B-1-like Neighboring gene tRNA (guanine(9)-N1)-methyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056038.1 Chromosome 7 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N1-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(9)-N1)-methyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056038.1 Reference SspV2 Primary Assembly

    Range
    29240079..29243406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042212591.1 → XP_042068525.1  tRNA (guanine(9)-N1)-methyltransferase-like

    UniProtKB/TrEMBL
    A0A8X8XRD7
    Conserved Domains (2) summary
    PTZ00266
    Location:65 → 150
    PTZ00266; NIMA-related protein kinase; Provisional
    cd18089
    Location:152 → 322
    SPOUT_Trm10-like; tRNA methyltransferase Trm10-like
Nucleotide Protein
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