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LOC122282553 uncharacterized LOC122282553 [ Carya illinoinensis ]

Gene ID: 122282553, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122282553
Gene description
uncharacterized LOC122282553
Locus tag
CIPAW_11G210700
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122282553 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 11 NC_056762.1 (45247476..45249272)

Chromosome 11 - NC_056762.1Genomic Context describing neighboring genes Neighboring gene photosystem I reaction center subunit V, chloroplastic Neighboring gene high mobility group B protein 10 Neighboring gene WPP domain-interacting protein 2-like Neighboring gene uncharacterized LOC122280782

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056762.1 Chromosome 11 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC122282553

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056762.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    45247476..45249272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043094486.1 → XP_042950420.1  uncharacterized protein LOC122282553

    UniProtKB/TrEMBL
    A0A8T1PAU9
    Conserved Domains (1) summary
    smart00355
    Location:430 → 452
    ZnF_C2H2; zinc finger
Nucleotide Protein
Heading Accession and Version

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