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LOC122283009 V-type proton ATPase subunit e1 [ Carya illinoinensis ]

Gene ID: 122283009, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122283009
Gene description
V-type proton ATPase subunit e1
Locus tag
CIPAW_11G195700
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122283009 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 11 NC_056762.1 (43752273..43754075, complement)

Chromosome 11 - NC_056762.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor TFIID subunit 6-like Neighboring gene cell division protein FtsZ homolog 1, chloroplastic-like Neighboring gene glycine-rich protein DC7.1-like Neighboring gene cold and drought-regulated protein CORA-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056762.1 Chromosome 11 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit e1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056762.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    43752273..43754075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043095129.1 → XP_042951063.1  V-type proton ATPase subunit e1

    UniProtKB/TrEMBL
    A0A8T1P7C0
    Conserved Domains (1) summary
    pfam05493
    Location:2 → 65
    ATP_synt_H; ATP synthase subunit H

  2. XM_043095131.1 → XP_042951065.1  V-type proton ATPase subunit e1

    UniProtKB/TrEMBL
    A0A8T1P7C0
    Conserved Domains (1) summary
    pfam05493
    Location:2 → 65
    ATP_synt_H; ATP synthase subunit H

  3. XM_043095130.1 → XP_042951064.1  V-type proton ATPase subunit e1

    UniProtKB/TrEMBL
    A0A8T1P7C0
    Conserved Domains (1) summary
    pfam05493
    Location:2 → 65
    ATP_synt_H; ATP synthase subunit H
Nucleotide Protein
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