U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122283033 deSI-like protein At4g17486 [ Carya illinoinensis ]

Gene ID: 122283033, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122283033
Gene description
deSI-like protein At4g17486
Locus tag
CIPAW_11G083700
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122283033 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 11 NC_056762.1 (26961171..26968357, complement)

Chromosome 11 - NC_056762.1Genomic Context describing neighboring genes Neighboring gene putative disease resistance protein At4g19050 Neighboring gene uncharacterized LOC122283018 Neighboring gene small nucleolar RNA R71 Neighboring gene ethylene-responsive transcription factor 5-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_056762.1 Chromosome 11 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptomic Analysis Provides Insights into Grafting Union Development in Pecan (Carya illinoinensis). Mo Z, et al. Genes (Basel), 2018 Feb 5. PMID 29401757, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
deSI-like protein At4g17486

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056762.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    26961171..26968357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043095185.1 → XP_042951119.1  deSI-like protein At4g17486 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NWV4, A0A8T1P2H0

  2. XM_043095184.1 → XP_042951118.1  deSI-like protein At4g17486 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NWV4, A0A8T1P2H0

  3. XM_043095186.1 → XP_042951120.1  deSI-like protein At4g17486 isoform X2

    UniProtKB/TrEMBL
    A0A8T1P1B3, A0A8T1P545

  4. XM_043095187.1 → XP_042951121.1  deSI-like protein At4g17486 isoform X3

    UniProtKB/TrEMBL
    A0A922DNA4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.