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LOC122295198 actin-related protein 7 [ Carya illinoinensis ]

Gene ID: 122295198, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122295198
Gene description
actin-related protein 7
Locus tag
CIPAW_14G000600
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122295198 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 14 NC_056765.1 (35182..41927, complement)

Chromosome 14 - NC_056765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122294602 Neighboring gene cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like Neighboring gene uncharacterized LOC122294229 Neighboring gene tRNA-dihydrouridine(20/20a) synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056765.1 Chromosome 14 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic Analysis Provides Insights into Grafting Union Development in Pecan (Carya illinoinensis). Mo Z, et al. Genes (Basel), 2018 Feb 5. PMID 29401757, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-related protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056765.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    35182..41927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043104312.1 → XP_042960246.1  actin-related protein 7

    UniProtKB/TrEMBL
    A0A8T1N987, A0A8T1NF07
    Conserved Domains (1) summary
    smart00268
    Location:5 → 361
    ACTIN; Actin

  2. XM_043104313.1 → XP_042960247.1  actin-related protein 7

    UniProtKB/TrEMBL
    A0A8T1N987, A0A8T1NF07
    Conserved Domains (1) summary
    smart00268
    Location:5 → 361
    ACTIN; Actin

  3. XM_043104311.1 → XP_042960245.1  actin-related protein 7

    UniProtKB/TrEMBL
    A0A8T1N987, A0A8T1NF07
    Conserved Domains (1) summary
    smart00268
    Location:5 → 361
    ACTIN; Actin
Nucleotide Protein
Heading Accession and Version

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