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LOC122309986 probable RNA helicase SDE3 [ Carya illinoinensis ]

Gene ID: 122309986, updated on 6-Nov-2021

Summary

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Gene symbol
LOC122309986
Gene description
probable RNA helicase SDE3
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122309986 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 5 NC_056756.1 (29341564..29346524)

Chromosome 5 - NC_056756.1Genomic Context describing neighboring genes Neighboring gene transcription factor TCP7-like Neighboring gene probable RNA helicase SDE3 Neighboring gene probable RNA helicase SDE3 Neighboring gene general transcription factor IIH subunit 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056756.1 Chromosome 5 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
probable RNA helicase SDE3; uncharacterized protein LOC122309986

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056756.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    29341564..29346524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043123837.1 → XP_042979771.1  probable RNA helicase SDE3 isoform X1

    Conserved Domains (1) summary
    cl28899
    Location:488 → 706
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_043123839.1 → XP_042979773.1  probable RNA helicase SDE3 isoform X2

    Conserved Domains (1) summary
    cl28899
    Location:405 → 623
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_043123838.1 → XP_042979772.1  probable RNA helicase SDE3 isoform X1

    Conserved Domains (1) summary
    cl28899
    Location:488 → 706
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  4. XM_043123841.1 → XP_042979775.1  uncharacterized protein LOC122309986 isoform X3

    Conserved Domains (1) summary
    cl28899
    Location:488 → 565
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein
Heading Accession and Version

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