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LOC122310246 uncharacterized LOC122310246 [ Carya illinoinensis ]

Gene ID: 122310246, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122310246
Gene description
uncharacterized LOC122310246
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122310246 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 5 NC_056756.1 (29206640..29208355, complement)

Chromosome 5 - NC_056756.1Genomic Context describing neighboring genes Neighboring gene E2F-associated phosphoprotein Neighboring gene uncharacterized LOC122310244 Neighboring gene transcription factor TCP7-like Neighboring gene probable RNA helicase SDE3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056756.1 Chromosome 5 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC122310246

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056756.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    29206640..29208355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043124125.1 → XP_042980059.1  uncharacterized protein LOC122310246

    Conserved Domains (2) summary
    cd00303
    Location:440 → 526
    retropepsin_like; Retropepsins; pepsin-like aspartate proteases
    pfam03732
    Location:166 → 264
    Retrotrans_gag; Retrotransposon gag protein
Nucleotide Protein
Heading Accession and Version

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