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ex FERM domain containing expanded [ Drosophila teissieri ]

Gene ID: 122626839, updated on 12-Oct-2024

Summary

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Gene symbol
ex
Gene description
FERM domain containing expanded
See related
EnsemblRapid:LOC122626839
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila teissieri
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2L
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Prin_Dtei_1.1 (GCF_016746235.2) 2L NC_053029.1 (468839..486665)

Chromosome 2L - NC_053029.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor-like protein 16 Neighboring gene tetratricopeptide repeat protein 8 Neighboring gene protein croquemort Neighboring gene DnaJ homolog shv

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053029.1 Chromosome 2L Reference Prin_Dtei_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of hippo signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein expanded

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila teissieri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dtei_1.1

Genomic

  1. NC_053029.1 Reference Prin_Dtei_1.1

    Range
    468839..486665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043807253.1 → XP_043663188.1  protein expanded

    Related
    XP_043663188.1, XM_043807253.1
    Conserved Domains (4) summary
    PHA03255
    Location:512 → 681
    PHA03255; BDLF3; Provisional
    smart00295
    Location:27 → 297
    B41; Band 4.1 homologues
    cd13185
    Location:298 → 405
    FERM_C_FRMD1_FRMD6; FERM domain C-lobe of FERM domain containing 1 and 6 proteins
    cd17101
    Location:25 → 128
    FERM_F1_PTPN13_like; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in tyrosine-protein phosphatase non-receptor type 13 (PTPN13) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases