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LOC122723352 eukaryotic translation initiation factor 3 subunit E [ Manihot esculenta (cassava) ]

Gene ID: 122723352, updated on 30-Nov-2023

Summary

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Gene symbol
LOC122723352
Gene description
eukaryotic translation initiation factor 3 subunit E
Locus tag
MANES_03G083322v8
Gene type
protein coding
RefSeq status
MODEL
Organism
Manihot esculenta
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
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Genomic context

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See LOC122723352 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
101 current M.esculenta_v8 (GCF_001659605.2) 3 NC_035163.2 (14861837..14867010)

Chromosome 3 - NC_035163.2Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 3 subunit E-like Neighboring gene uncharacterized LOC122723281 Neighboring gene retinoblastoma-related protein-like Neighboring gene mitogen-activated protein kinase kinase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035163.2 Chromosome 3 Reference M.esculenta_v8 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M.esculenta_v8 Primary Assembly

Genomic

  1. NC_035163.2 Reference M.esculenta_v8 Primary Assembly

    Range
    14861837..14867010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043955404.1 → XP_043811339.1  eukaryotic translation initiation factor 3 subunit E

    UniProtKB/TrEMBL
    A0A2C9V6V7
    Conserved Domains (1) summary
    smart00088
    Location:335 → 409
    PINT; motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
Nucleotide Protein
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