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prdx6 peroxiredoxin 6 [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122760559, updated on 22-Mar-2024

Summary

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Gene symbol
prdx6
Gene description
peroxiredoxin 6
Locus tag
JOB18_027665
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See prdx6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) Unplaced Scaffold NW_025320885.1 (27074..32066)

NW_025320885.1Genomic Context describing neighboring genes Neighboring gene flavin-containing monooxygenase 5-like Neighboring gene phospholipid phosphatase 6 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC122760565

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025320885 Unplaced Scaffold Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peroxiredoxin activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxiredoxin-6
Names
peroxiredoxin-6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NW_025320885.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    27074..32066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044015666.1 → XP_043871601.1  peroxiredoxin-6

    Conserved Domains (1) summary
    cd03016
    Location:6 → 220
    PRX_1cys; Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by ...
Nucleotide Protein
Heading Accession and Version

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