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TCIM transcriptional and immune response regulator [ Neogale vison (American mink) ]

Gene ID: 122919257, updated on 22-Mar-2024

Summary

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Gene symbol
TCIM
Gene description
transcriptional and immune response regulator
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Also known as
CH004
Orthologs
human mouse all
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Genomic context

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See TCIM in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 11 NC_058101.1 (175658340..175659656, complement)

Chromosome 11 - NC_058101.1Genomic Context describing neighboring genes Neighboring gene SRA stem-loop-interacting RNA-binding protein, mitochondrial-like Neighboring gene 60S ribosomal protein L15-like Neighboring gene indoleamine 2,3-dioxygenase 2 Neighboring gene indoleamine 2,3-dioxygenase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058101.1 Chromosome 11 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional and immune response regulator
Names
Uncharacterized protein C8orf4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058101.1 Reference ASM_NN_V1 Primary Assembly

    Range
    175658340..175659656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044268194.1 → XP_044124129.1  transcriptional and immune response regulator

    UniProtKB/TrEMBL
    U6CTB9
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases