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flii FLII actin remodeling protein [ Thunnus albacares (yellowfin tuna) ]

Gene ID: 122967430, updated on 22-Mar-2024

Summary

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Gene symbol
flii
Gene description
FLII actin remodeling protein
See related
EnsemblRapid:ENSTABG00005010231
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus albacares
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
human zebrafish all
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Genomic context

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See flii in Genome Data Viewer
Location:
chromosome: 17
Exon count:
31
Annotation release Status Assembly Chr Location
100 current fThuAlb1.1 (GCF_914725855.1) 17 NC_058122.1 (9437622..9452144)

Chromosome 17 - NC_058122.1Genomic Context describing neighboring genes Neighboring gene protein shisa-8 Neighboring gene desumoylating isopeptidase 1a Neighboring gene LLGL scribble cell polarity complex component 1 Neighboring gene myosin XVAa

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058122.1 Chromosome 17 Reference fThuAlb1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas. Ciezarek AG, et al. Genome Biol Evol, 2016 Oct 5. PMID 27614233, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein flightless-1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuAlb1.1

Genomic

  1. NC_058122.1 Reference fThuAlb1.1

    Range
    9437622..9452144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044332089.1 → XP_044188024.1  protein flightless-1 homolog

    Related
    ENSTABP00005025317.1, ENSTABT00005025625.1
    Conserved Domains (7) summary
    cd11280
    Location:618 → 704
    gelsolin_like; Tandemly repeated domains found in gelsolin, severin, villin, and related proteins
    cd11288
    Location:1050 → 1150
    gelsolin_S5_like; Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins
    cd11290
    Location:491 → 602
    gelsolin_S1_like; Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins
    cd11291
    Location:1161 → 1259
    gelsolin_S6_like; Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins
    cd11292
    Location:721 → 836
    gelsolin_S3_like; Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins
    PLN00113
    Location:5 → 373
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:106 → 128
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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