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opn5 opsin 5 [ Thunnus albacares (yellowfin tuna) ]

Gene ID: 123000059, updated on 22-Mar-2024

Summary

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Gene symbol
opn5
Gene description
opsin 5
See related
EnsemblRapid:ENSTABG00005006228
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus albacares
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
zebrafish all
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Genomic context

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See opn5 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fThuAlb1.1 (GCF_914725855.1) 16 NC_058121.1 (4781882..4850221, complement)

Chromosome 16 - NC_058121.1Genomic Context describing neighboring genes Neighboring gene patched domain containing 4 Neighboring gene uncharacterized LOC122965350 Neighboring gene uncharacterized LOC122965499 Neighboring gene uncharacterized LOC123000046

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058121.1 Chromosome 16 Reference fThuAlb1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
opsin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuAlb1.1

Genomic

  1. NC_058121.1 Reference fThuAlb1.1

    Range
    4781882..4850221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044377496.1 → XP_044233431.1  opsin-5 isoform X2

    Related
    ENSTABP00005015198.1, ENSTABT00005015352.1
    Conserved Domains (1) summary
    cd15074
    Location:35 → 316
    7tmA_Opsin5_neuropsin; neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_044377498.1 → XP_044233433.1  opsin-5 isoform X3

    Conserved Domains (1) summary
    cd15074
    Location:2 → 270
    7tmA_Opsin5_neuropsin; neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_044377495.1 → XP_044233430.1  opsin-5 isoform X1

    Conserved Domains (1) summary
    cd15074
    Location:71 → 343
    7tmA_Opsin5_neuropsin; neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_044377497.1 → XP_044233432.1  opsin-5 isoform X3

    Conserved Domains (1) summary
    cd15074
    Location:2 → 270
    7tmA_Opsin5_neuropsin; neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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