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SIDT2 SID1 transmembrane family member 2 [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036864, updated on 22-Mar-2024

Summary

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Gene symbol
SIDT2
Gene description
SID1 transmembrane family member 2
Locus tag
EYD10_16332
See related
Ensembl:ENSVKKG00000003735
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See SIDT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336520.1 (145455..158796, complement)

NW_025336520.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 7 Neighboring gene transgelin Neighboring gene platelet activating factor acetylhydrolase 1b catalytic subunit 2 Neighboring gene SIK family kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025336520 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SID1 transmembrane family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336520.1 Reference ASM479886v1

    Range
    145455..158796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044456354.1 → XP_044312289.1  SID1 transmembrane family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8D2J0K8
    Related
    ENSVKKP00000005026.1, ENSVKKT00000005164.1

  2. XM_044456358.1 → XP_044312293.1  SID1 transmembrane family member 2 isoform X4

    UniProtKB/TrEMBL
    A0A8D2ITL0
    Related
    ENSVKKP00000005036.1, ENSVKKT00000005175.1

  3. XM_044456356.1 → XP_044312291.1  SID1 transmembrane family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8D2J0K8

  4. XM_044456357.1 → XP_044312292.1  SID1 transmembrane family member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8D2IZH8
    Related
    ENSVKKP00000005030.1, ENSVKKT00000005168.1

  5. XM_044456359.1 → XP_044312294.1  SID1 transmembrane family member 2 isoform X5

  6. XM_044456361.1 → XP_044312296.1  SID1 transmembrane family member 2 isoform X7

  7. XM_044456362.1 → XP_044312297.1  SID1 transmembrane family member 2 isoform X8

  8. XM_044456360.1 → XP_044312295.1  SID1 transmembrane family member 2 isoform X6

Nucleotide Protein
Heading Accession and Version

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