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FAAP100 FA core complex associated protein 100 [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036897, updated on 22-Mar-2024

Summary

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Gene symbol
FAAP100
Gene description
FA core complex associated protein 100
Locus tag
EYD10_16375
See related
Ensembl:ENSVKKG00000016388
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See FAAP100 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336531.1 (278294..299330)

NW_025336531.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 6G Neighboring gene tetraspanin 10 Neighboring gene NPL4 homolog, ubiquitin recognition factor Neighboring gene fascin actin-bundling protein 2, retinal Neighboring gene actin gamma 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025336531 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia core complex-associated protein 100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336531.1 Reference ASM479886v1

    Range
    278294..299330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044456412.1 → XP_044312347.1  Fanconi anemia core complex-associated protein 100

    UniProtKB/TrEMBL
    A0A8D2LPE2
    Related
    ENSVKKP00000024885.1, ENSVKKT00000025491.1
    Conserved Domains (1) summary
    PTZ00035
    Location:448 → 504
    PTZ00035; Rad51 protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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