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GAA alpha glucosidase [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036907, updated on 22-Mar-2024

Summary

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Gene symbol
GAA
Gene description
alpha glucosidase
Locus tag
EYD10_16397
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Also known as
Gaa_0
Orthologs
human mouse all
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Genomic context

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See GAA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336531.1 (1960175..1981358, complement)

NW_025336531.1Genomic Context describing neighboring genes Neighboring gene N-sulfoglucosamine sulfohydrolase Neighboring gene caspase recruitment domain family member 14 Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene RecQ mediated genome instability 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025336531 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-glucosidase
Names
Lysosomal alpha-glucosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336531.1 Reference ASM479886v1

    Range
    1960175..1981358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044456425.1 → XP_044312360.1  lysosomal alpha-glucosidase

    Conserved Domains (3) summary
    cd00111
    Location:103 → 149
    Trefoil; P or trefoil or TFF domain; Trefoil factor family domain peptides are mucin-associated molecules, largely found in epithelia of gastrointestinal tissues. Function is not known but it was originally identified from mucosal tissues, where it may have a ...
    cd06602
    Location:378 → 717
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:265 → 378
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
Nucleotide Protein
Heading Accession and Version

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