U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TBC1D16 TBC1 domain family member 16 [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036909, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TBC1D16
Gene description
TBC1 domain family member 16
Locus tag
EYD10_16401
See related
Ensembl:ENSVKKG00000016732
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TBC1D16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336531.1 (2021718..2088200)

NW_025336531.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene RecQ mediated genome instability 2 Neighboring gene chromobox 4 Neighboring gene chromobox 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_025336531 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TBC1 domain family member 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336531.1 Reference ASM479886v1

    Range
    2021718..2088200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044456428.1 → XP_044312363.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8D2LRW1
    Related
    ENSVKKP00000025495.1, ENSVKKT00000026110.1
    Conserved Domains (1) summary
    smart00164
    Location:446 → 674
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_044456430.1 → XP_044312365.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8D2LRW1
    Conserved Domains (1) summary
    smart00164
    Location:446 → 674
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_044456431.1 → XP_044312366.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8D2LRW1
    Conserved Domains (1) summary
    smart00164
    Location:446 → 674
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  4. XM_044456427.1 → XP_044312362.1  TBC1 domain family member 16 isoform X1

    UniProtKB/TrEMBL
    A0A8D2LRW1
    Conserved Domains (1) summary
    smart00164
    Location:446 → 674
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  5. XM_044456432.1 → XP_044312367.1  TBC1 domain family member 16 isoform X2

    Conserved Domains (1) summary
    smart00164
    Location:170 → 398
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  6. XM_044456433.1 → XP_044312368.1  TBC1 domain family member 16 isoform X3

    Conserved Domains (1) summary
    smart00164
    Location:211 → 439
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RNA

  1. XR_006417228.1 RNA Sequence

  2. XR_006417229.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.