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GPRC5C G protein-coupled receptor class C group 5 member C [ Varanus komodoensis (Komodo dragon) ]

Gene ID: 123036917, updated on 22-Mar-2024

Summary

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Gene symbol
GPRC5C
Gene description
G protein-coupled receptor class C group 5 member C
Locus tag
EYD10_16369
See related
Ensembl:ENSVKKG00000016356
Gene type
protein coding
RefSeq status
MODEL
Organism
Varanus komodoensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
Orthologs
human mouse all
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Genomic context

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See GPRC5C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336531.1 (94207..135264, complement)

NW_025336531.1Genomic Context describing neighboring genes Neighboring gene BTB domain containing 17 Neighboring gene G protein-coupled receptor 142 Neighboring gene coiled-coil domain containing 137 Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene oxidoreductase like domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025336531 Unplaced Scaffold Reference ASM479886v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein coupled receptor family C group 5 member C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM479886v1

Genomic

  1. NW_025336531.1 Reference ASM479886v1

    Range
    94207..135264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044456447.1 → XP_044312382.1  G-protein coupled receptor family C group 5 member C isoform X2

    UniProtKB/TrEMBL
    A0A8D2LMR8
    Conserved Domains (1) summary
    cd15277
    Location:55 → 300
    7tmC_RAIG3_GPRC5C; retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of seven-transmembrane G protein-coupled receptors, group 5, member C

  2. XM_044456445.1 → XP_044312380.1  G-protein coupled receptor family C group 5 member C isoform X1

    UniProtKB/TrEMBL
    A0A8D2LMR8
    Conserved Domains (1) summary
    cd15277
    Location:72 → 317
    7tmC_RAIG3_GPRC5C; retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of seven-transmembrane G protein-coupled receptors, group 5, member C

  3. XM_044456449.1 → XP_044312384.1  G-protein coupled receptor family C group 5 member C isoform X4

    UniProtKB/TrEMBL
    A0A8D2LMR8
    Conserved Domains (1) summary
    cd15277
    Location:72 → 317
    7tmC_RAIG3_GPRC5C; retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of seven-transmembrane G protein-coupled receptors, group 5, member C

  4. XM_044456448.1 → XP_044312383.1  G-protein coupled receptor family C group 5 member C isoform X3

    UniProtKB/TrEMBL
    A0A8D2LMR8
    Related
    ENSVKKP00000024830.1, ENSVKKT00000025433.1
    Conserved Domains (1) summary
    cd15277
    Location:72 → 317
    7tmC_RAIG3_GPRC5C; retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of seven-transmembrane G protein-coupled receptors, group 5, member C

RNA

  1. XR_006417231.1 RNA Sequence

  2. XR_006417232.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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