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HNF1A HNF1 homeobox A [ Gracilinanus agilis (Agile Gracile Mouse Opossum) ]

Gene ID: 123256898, updated on 22-Mar-2024

Summary

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Gene symbol
HNF1A
Gene description
HNF1 homeobox A
Gene type
protein coding
RefSeq status
MODEL
Organism
Gracilinanus agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Gracilinanus
Orthologs
human mouse all
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Genomic context

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See HNF1A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current AgileGrace (GCF_016433145.1) 1 NC_058130.1 (768148701..768210174)

Chromosome 1 - NC_058130.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase short chain Neighboring gene signal peptide peptidase like 3 Neighboring gene basic leucine zipper and W2 domain-containing protein 1-like Neighboring gene chromosome 1 C12orf43 homolog Neighboring gene 2'-5'-oligoadenylate synthase-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058130.1 Chromosome 1 Reference AgileGrace Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pancreas development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatocyte nuclear factor 1-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gracilinanus agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AgileGrace Primary Assembly

Genomic

  1. NC_058130.1 Reference AgileGrace Primary Assembly

    Range
    768148701..768210174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044685451.1 → XP_044541386.1  hepatocyte nuclear factor 1-alpha

    Conserved Domains (1) summary
    cd00086
    Location:159 → 232
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
Heading Accession and Version

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