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LOC123416997 ATP synthase subunit 9, mitochondrial [ Hordeum vulgare subsp. vulgare (domesticated barley) ]

Gene ID: 123416997, updated on 18-Sep-2024

Summary

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Gene symbol
LOC123416997
Gene description
ATP synthase subunit 9, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Hordeum vulgare subsp. vulgare (sub-species: vulgare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Genomic context

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See LOC123416997 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current MorexV3_pseudomolecules_assembly (GCF_904849725.1) Unplaced Scaffold NW_025422489.1 (383716..393230)

NW_025422489.1Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone oxidoreductase chain 1-like Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene uncharacterized tatC-like protein ymf16 Neighboring gene ATP synthase subunit alpha, mitochondrial Neighboring gene transfer RNA lysine (anticodon UUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025422489 Unplaced Scaffold Reference MorexV3_pseudomolecules_assembly Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit 9, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hordeum vulgare subsp. vulgare Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MorexV3_pseudomolecules_assembly Primary Assembly

Genomic

  1. NW_025422489.1 Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Range
    383716..393230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045106852.1 → XP_044962787.1  ATP synthase subunit 9, mitochondrial

    UniProtKB/TrEMBL
    A0A8I6YKU9
    Conserved Domains (1) summary
    cd18182
    Location:55 → 103
    ATP-synt_Fo_c_ATP5G3; ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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