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ELF4 E74 like ETS transcription factor 4 [ Leopardus geoffroyi (Geoffroy's cat) ]

Gene ID: 123595387, updated on 22-Mar-2024

Summary

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Gene symbol
ELF4
Gene description
E74 like ETS transcription factor 4
See related
EnsemblRapid:ENSFCTG00000004845
Gene type
protein coding
RefSeq status
MODEL
Organism
Leopardus geoffroyi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus
Orthologs
human mouse all
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Genomic context

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See ELF4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
100 current O.geoffroyi_Oge1_pat1.0 (GCF_018350155.1) X NC_059343.1 (108169944..108220615, complement)

Chromosome X - NC_059343.1Genomic Context describing neighboring genes Neighboring gene UTP14A small subunit processome component Neighboring gene BCL6 corepressor like 1 Neighboring gene 40S ribosomal protein S11-like Neighboring gene apoptosis inducing factor mitochondria associated 1 Neighboring gene zinc finger protein 280C Neighboring gene RAB33A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059343.1 Chromosome X Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS-related transcription factor Elf-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leopardus geoffroyi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

Genomic

  1. NC_059343.1 Reference O.geoffroyi_Oge1_pat1.0 Primary Assembly

    Range
    108169944..108220615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045473072.1 → XP_045329028.1  ETS-related transcription factor Elf-4 isoform X4

  2. XM_045473069.1 → XP_045329025.1  ETS-related transcription factor Elf-4 isoform X2

  3. XM_045473064.1 → XP_045329020.1  ETS-related transcription factor Elf-4 isoform X1

  4. XM_045473067.1 → XP_045329023.1  ETS-related transcription factor Elf-4 isoform X2

    Related
    ENSFCTP00000008387.1, ENSFCTT00000012689.1

  5. XM_045473070.1 → XP_045329026.1  ETS-related transcription factor Elf-4 isoform X3

  6. XM_045473063.1 → XP_045329019.1  ETS-related transcription factor Elf-4 isoform X1

  7. XM_045473068.1 → XP_045329024.1  ETS-related transcription factor Elf-4 isoform X2

    Related
    ENSFCTP00000008393.1, ENSFCTT00000012696.1

  8. XM_045473071.1 → XP_045329027.1  ETS-related transcription factor Elf-4 isoform X4

  9. XM_045473065.1 → XP_045329021.1  ETS-related transcription factor Elf-4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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