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CFTR CF transmembrane conductance regulator [ Lemur catta (Ring-tailed lemur) ]

Gene ID: 123646968, updated on 22-Mar-2024

Summary

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Gene symbol
CFTR
Gene description
CF transmembrane conductance regulator
Gene type
protein coding
RefSeq status
MODEL
Organism
Lemur catta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur
Orthologs
human mouse all
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Genomic context

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See CFTR in Genome Data Viewer
Location:
chromosome: 11
Exon count:
27
Annotation release Status Assembly Chr Location
100 current mLemCat1.pri (GCF_020740605.2) 11 NC_059138.1 (28662540..28805237, complement)

Chromosome 11 - NC_059138.1Genomic Context describing neighboring genes Neighboring gene cortactin binding protein 2 Neighboring gene ribosomal biogenesis factor-like Neighboring gene small nucleolar RNA U13 Neighboring gene ankyrin repeat, SAM and basic leucine zipper domain containing 1 Neighboring gene Wnt family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059138.1 Chromosome 11 Reference mLemCat1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystic fibrosis transmembrane conductance regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lemur catta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLemCat1.pri Primary Assembly

Genomic

  1. NC_059138.1 Reference mLemCat1.pri Primary Assembly

    Range
    28662540..28805237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045564145.1 → XP_045420101.1  cystic fibrosis transmembrane conductance regulator

Nucleotide Protein
Heading Accession and Version

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