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Gm57850 predicted gene, 57850 [ Mus musculus (house mouse) ]

Gene ID: 123956256, updated on 28-Oct-2024

Summary

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Official Symbol
Gm57850provided by MGI
Official Full Name
predicted gene, 57850provided by MGI
Primary source
MGI:MGI:7512647
See related
AllianceGenome:MGI:7512647
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ripply2-cyb5r4
Summary
This locus represents naturally occurring readthrough transcription between the neighboring Ripply2 (ripply transcriptional repressor 2) and Cyb5r4 (cytochrome b5 reductase 4) genes on chromosome 9. Multiple readthrough transcript variants exist for this readthrough gene. Multiple variants encode a fusion protein that shares sequence identity with each individual gene product. Additional readthrough transcript variants are candidates for nonsense-mediated mRNA decay (NMD), and are unlikely to produce a protein product. [provided by RefSeq, Jan 2022]
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Genomic context

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See Gm57850 in Genome Data Viewer
Location:
9; 9
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (86897590..86959827)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene synaptosomal-associated protein 91 Neighboring gene STARR-seq mESC enhancer starr_24841 Neighboring gene STARR-seq mESC enhancer starr_24843 Neighboring gene predicted gene, 39389 Neighboring gene predicted gene, 36539 Neighboring gene STARR-positive B cell enhancer ABC_E2909 Neighboring gene STARR-positive B cell enhancer ABC_E6782 Neighboring gene ripply transcriptional repressor 2 Neighboring gene cytochrome b5 reductase 4 Neighboring gene predicted gene 8282 Neighboring gene melanocortin 2 receptor accessory protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000075.7 Chromosome 9 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC123956256
Names
Ripply2-Cyb5r4 readthrough

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001400776.1 → NP_001387705.1  uncharacterized protein LOC123956256 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC156793

  2. NM_001400777.1 → NP_001387706.1  uncharacterized protein LOC123956256 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC156793

RNA

  1. NR_174606.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC156793

  2. NR_174607.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC156793

  3. NR_174608.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC156793

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    86897590..86959827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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