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Spf45 splicing factor 45 [ Vespa crabro (European hornet) ]

Gene ID: 124424520, updated on 10-Oct-2024

Summary

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Gene symbol
Spf45
Gene description
splicing factor 45
See related
EnsemblRapid:ENSVCRG00010013249
Gene type
protein coding
RefSeq status
MODEL
Organism
Vespa crabro
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespa
Orthologs
fruit fly honey bee all
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Genomic context

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See Spf45 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
100 current iyVesCrab1.2 (GCF_910589235.1) 5 NC_060959.1 (7985621..7987638, complement)

Chromosome 5 - NC_060959.1Genomic Context describing neighboring genes Neighboring gene dynein beta chain, ciliary-like Neighboring gene NAD-dependent methylenetetrahydrofolate dehydrogenase Neighboring gene oligoribonuclease, mitochondrial Neighboring gene alpha-1,3/1,6-mannosyltransferase Alg2 Neighboring gene scarface Neighboring gene Kv channel-interacting protein 2-like Neighboring gene uncharacterized LOC124424160

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_060959.1 Chromosome 5 Reference iyVesCrab1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary History of the Hymenoptera. Peters RS, et al. Curr Biol, 2017 Apr 3. PMID 28343967
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
splicing factor 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vespa crabro Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyVesCrab1.2

Genomic

  1. NC_060959.1 Reference iyVesCrab1.2

    Range
    7985621..7987638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046963695.1 → XP_046819651.1  splicing factor 45

    Related
    ENSVCRP00010023419.1, ENSVCRT00010027470.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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