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commd7 COMM domain containing 7 [ Girardinichthys multiradiatus ]

Gene ID: 124877075, updated on 22-Mar-2024

Summary

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Gene symbol
commd7
Gene description
COMM domain containing 7
See related
EnsemblRapid:ENSGMLG00005013374
Gene type
protein coding
RefSeq status
MODEL
Organism
Girardinichthys multiradiatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Goodeidae; Girardinichthys
Orthologs
human zebrafish all
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Genomic context

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See commd7 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current DD_fGirMul_XY1 (GCF_021462225.1) 1 NC_061794.1 (46056742..46073044, complement)

Chromosome 1 - NC_061794.1Genomic Context describing neighboring genes Neighboring gene src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites Neighboring gene nucleolar protein 4-like Neighboring gene DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.1 Neighboring gene uncharacterized LOC124869291 Neighboring gene DNA (cytosine-5)-methyltransferase 3B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061794.1 Chromosome 1 Reference DD_fGirMul_XY1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NF-kappaB binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COMM domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Girardinichthys multiradiatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_fGirMul_XY1

Genomic

  1. NC_061794.1 Reference DD_fGirMul_XY1

    Range
    46056742..46073044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047380139.1 → XP_047236095.1  COMM domain-containing protein 7 isoform X2

  2. XM_047380138.1 → XP_047236094.1  COMM domain-containing protein 7 isoform X1

  3. XM_047380137.1 → XP_047236093.1  COMM domain-containing protein 7 isoform X1

  4. XM_047380136.1 → XP_047236092.1  COMM domain-containing protein 7 isoform X1

RNA

  1. XR_007040442.1 RNA Sequence

    Related
    ENSGMLT00005024094.1
Nucleotide Protein
Heading Accession and Version

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