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LOC124900216 uncharacterized LOC124900216 [ Homo sapiens (human) ]

Gene ID: 124900216, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124900216
Gene description
uncharacterized LOC124900216
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124900216 in Genome Data Viewer
Location:
6q22.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (128122989..128184425, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (129315011..129377548, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene thymocyte selection associated Neighboring gene MPRA-validated peak6119 silencer Neighboring gene mitochondrial ribosomal protein S17 pseudogene 5 Neighboring gene NANOG hESC enhancer GRCh37_chr6:128343084-128343585 Neighboring gene protein tyrosine phosphatase receptor type K Neighboring gene PTPRK antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:128446823-128447021 Neighboring gene Sharpr-MPRA regulatory region 6879 Neighboring gene NANOG hESC enhancer GRCh37_chr6:128605097-128605598 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:128840918-128841511 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:128841512-128842106 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:128901198-128901760 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:128901761-128902322 Neighboring gene small nucleolar RNA U13 Neighboring gene eukaryotic translation elongation factor 1 delta pseudogene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    128122989..128184425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059752.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187556.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    471224..533759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007068622.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    129315011..129377548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077114.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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