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LOC124900476 endogenous retrovirus group K member 5 Gag polyprotein-like [ Homo sapiens (human) ]

Gene ID: 124900476, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124900476
Gene description
endogenous retrovirus group K member 5 Gag polyprotein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124900476 in Genome Data Viewer
Location:
22q11.23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (23536881..23547805)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (23984140..23995036)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2557 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13540 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23864674-23865240 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23865241-23865806 Neighboring gene uncharacterized LOC107985580 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23871859-23872474 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23874941-23875556 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23876790-23877405 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:23877406-23878022 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr22:23878638-23879254 Neighboring gene Sharpr-MPRA regulatory region 4313 Neighboring gene Sharpr-MPRA regulatory regions 962 and 2236 Neighboring gene prostate cancer associated transcript 14 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:23891199-23891699 Neighboring gene Sharpr-MPRA regulatory region 8041 Neighboring gene uncharacterized LOC105372957 Neighboring gene immunoglobulin lambda like polypeptide 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General protein information

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Preferred Names
endogenous retrovirus group K member 5 Gag polyprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    23536881..23547805
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047441690.1 → XP_047297646.1  endogenous retrovirus group K member 5 Gag polyprotein-like

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    23984140..23995036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054326265.1 → XP_054182240.1  endogenous retrovirus group K member 5 Gag polyprotein-like

Nucleotide Protein
Heading Accession and Version

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