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LOC124904631 U1 spliceosomal RNA [ Homo sapiens (human) ]

Gene ID: 124904631, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124904631
Gene description
U1 spliceosomal RNA
See related
Ensembl:ENSG00000273727
Gene type
snRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124904631 in Genome Data Viewer
Location:
1p12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (120354987..120355148)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (120368253..120368414)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145096721-145097286 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145096155-145096720 Neighboring gene SEC22 homolog B, vesicle trafficking protein Neighboring gene uncharacterized LOC100996723 Neighboring gene NANOG hESC enhancer GRCh37_chr1:144689698-144690199 Neighboring gene uncharacterized LOC124904391 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:144504660-144505204 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:144533587-144533917 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:144533911-144534909 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:144538085-144538656 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:144539249-144539810 Neighboring gene uncharacterized LOC101929788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:144582720-144583220 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:144583221-144583722 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:144592931-144593854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:144593855-144594776 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:144603371-144603926 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:144603927-144604483 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:144604484-144605039 Neighboring gene NBPF member 8 Neighboring gene profilin 1 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    120354987..120355148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007067132.1 RNA Sequence

    Related
    ENST00000614085.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    120368253..120368414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071402.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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