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Mia MIA SH3 domain containing [ Mus musculus (house mouse) ]

Gene ID: 12587, updated on 2-Nov-2024

Summary

Official Symbol
Miaprovided by MGI
Official Full Name
MIA SH3 domain containingprovided by MGI
Primary source
MGI:MGI:109615
See related
Ensembl:ENSMUSG00000089661 AllianceGenome:MGI:109615
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mia1; Cdrap; CD-RAP
Summary
Predicted to enable growth factor activity. Acts upstream of or within cell-matrix adhesion and extracellular matrix organization. Predicted to be located in extracellular region. Is expressed in several structures, including articular cartilage; autopod; respiratory system; sensory organ; and skeleton. Orthologous to human MIA (MIA SH3 domain containing). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in limb E14.5 (RPKM 50.9), genital fat pad adult (RPKM 27.5) and 8 other tissues See more
Orthologs
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Genomic context

See Mia in Genome Data Viewer
Location:
7 A3; 7 15.84 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (26879166..26880574, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (27179741..27181149, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene egl-9 family hypoxia-inducible factor 2 Neighboring gene STARR-positive B cell enhancer mm9_chr7:27952094-27952395 Neighboring gene RAB4B, member RAS oncogene family Neighboring gene STARR-positive B cell enhancers ABC_E1725 and ABC_E288 Neighboring gene microRNA 3101 Neighboring gene small nuclear ribonucleoprotein polypeptide A Neighboring gene STARR-positive B cell enhancer ABC_E3707 Neighboring gene actin maturation protease Neighboring gene microRNA 1191

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Potential readthrough

Included gene: Rab4b

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell-matrix adhesion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in extracellular matrix organization IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within extracellular matrix organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
melanoma-derived growth regulatory protein
Names
cartilage-derived retinoic acid-sensitive protein
melanoma inhibitory activity 1
melanoma inhibitory activity protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019394.3NP_062267.2  melanoma-derived growth regulatory protein precursor

    See identical proteins and their annotated locations for NP_062267.2

    Status: VALIDATED

    Source sequence(s)
    AW047492, BE864464, CK794645
    Consensus CDS
    CCDS21013.1
    UniProtKB/Swiss-Prot
    O09086, P97495, Q61865
    UniProtKB/TrEMBL
    G5E8V2
    Related
    ENSMUSP00000071876.7, ENSMUST00000071986.13
    Conserved Domains (1) summary
    cl17036
    Location:33129
    SH3; Src Homology 3 domain superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    26879166..26880574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)