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LOC125965699 uncharacterized LOC125965699 [ Orcinus orca (killer whale) ]

Gene ID: 125965699, updated on 2-Nov-2023

Summary

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Gene symbol
LOC125965699
Gene description
uncharacterized LOC125965699
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
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Genomic context

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See LOC125965699 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (684756..832457)

Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125964776 Neighboring gene metabotropic glutamate receptor 7-like Neighboring gene uncharacterized LOC117203198 Neighboring gene uncharacterized LOC125964829 Neighboring gene uncharacterized LOC125964837 Neighboring gene UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit-like Neighboring gene uncharacterized LOC125964826 Neighboring gene uncharacterized LOC125964836

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables group III metabotropic glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled glutamate receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC125965699

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    684756..832457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049716403.1 → XP_049572360.1  uncharacterized protein LOC125965699

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases