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SLC6A13 solute carrier family 6 member 13 [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126048110, updated on 3-Aug-2024

Summary

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Gene symbol
SLC6A13
Gene description
solute carrier family 6 member 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human mouse all
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Genomic context

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See SLC6A13 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 18 NC_064897.1 (17370124..17402975)

Chromosome 18 - NC_064897.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 77 Neighboring gene lysine demethylase 5A Neighboring gene solute carrier family 6 member 12 Neighboring gene sodium- and chloride-dependent GABA transporter 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064897.1 Chromosome 18 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064897.1 Reference bAccGen1.1

    Range
    17370124..17402975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049822666.1 → XP_049678623.1  sodium- and chloride-dependent GABA transporter 2 isoform X3

  2. XM_049822665.1 → XP_049678622.1  sodium- and chloride-dependent GABA transporter 2 isoform X3

  3. XM_049822663.1 → XP_049678620.1  sodium- and chloride-dependent GABA transporter 2 isoform X1

  4. XM_049822664.1 → XP_049678621.1  sodium- and chloride-dependent GABA transporter 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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