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SLC6A12 solute carrier family 6 member 12 [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126048111, updated on 3-Aug-2024

Summary

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Gene symbol
SLC6A12
Gene description
solute carrier family 6 member 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human all
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Genomic context

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See SLC6A12 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 18 NC_064897.1 (17411403..17462999)

Chromosome 18 - NC_064897.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 5A Neighboring gene solute carrier family 6 member 13 Neighboring gene sodium- and chloride-dependent GABA transporter 1-like Neighboring gene IQ motif and Sec7 domain ArfGEF 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064897.1 Chromosome 18 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent betaine transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064897.1 Reference bAccGen1.1

    Range
    17411403..17462999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049822670.1 → XP_049678627.1  sodium- and chloride-dependent betaine transporter isoform X4

  2. XM_049822669.1 → XP_049678626.1  sodium- and chloride-dependent betaine transporter isoform X3

  3. XM_049822667.1 → XP_049678624.1  sodium- and chloride-dependent betaine transporter isoform X1

  4. XM_049822668.1 → XP_049678625.1  sodium- and chloride-dependent betaine transporter isoform X2

RNA

  1. XR_007508794.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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