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WASHC1 WASH complex subunit 1 [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126048114, updated on 3-Aug-2024

Summary

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Gene symbol
WASHC1
Gene description
WASH complex subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human mouse all
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Genomic context

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See WASHC1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 18 NC_064897.1 (17639274..17685812)

Chromosome 18 - NC_064897.1Genomic Context describing neighboring genes Neighboring gene sodium- and chloride-dependent GABA transporter 1-like Neighboring gene IQ motif and Sec7 domain ArfGEF 3 Neighboring gene zinc finger protein 501-like Neighboring gene DEAD/H-box helicase 11 Neighboring gene uncharacterized LOC126047995

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064897.1 Chromosome 18 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064897.1 Reference bAccGen1.1

    Range
    17639274..17685812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049822676.1 → XP_049678633.1  WASH complex subunit 1 isoform X3

  2. XM_049822675.1 → XP_049678632.1  WASH complex subunit 1 isoform X2

  3. XM_049822677.1 → XP_049678634.1  WASH complex subunit 1 isoform X3

  4. XM_049822678.1 → XP_049678635.1  WASH complex subunit 1 isoform X3

  5. XM_049822679.1 → XP_049678636.1  WASH complex subunit 1 isoform X3

  6. XM_049822673.1 → XP_049678630.1  WASH complex subunit 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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