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ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126051899, updated on 3-Aug-2024

Summary

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Gene symbol
ILRUN
Gene description
inflammation and lipid regulator with UBA-like and NBR1-like domains
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human mouse all
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Genomic context

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See ILRUN in Genome Data Viewer
Location:
chromosome: 29
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 29 NC_064908.1 (5185474..5220270, complement)

Chromosome 29 - NC_064908.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 1 Neighboring gene SAM pointed domain containing ETS transcription factor Neighboring gene small nuclear ribonucleoprotein polypeptide C Neighboring gene bridge-like lipid transfer protein family member 3A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064908.1 Chromosome 29 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ILRUN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064908.1 Reference bAccGen1.1

    Range
    5185474..5220270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049831734.1 → XP_049687691.1  protein ILRUN isoform X1

    Conserved Domains (2) summary
    cd14349
    Location:23 → 64
    UBA_CF106; UBA-like domain found in uncharacterized protein C6orf106 and similar proteins
    pfam16158
    Location:82 → 179
    N_BRCA1_IG; Ig-like domain from next to BRCA1 gene

  2. XM_049831735.1 → XP_049687692.1  protein ILRUN isoform X2

Nucleotide Protein
Heading Accession and Version

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