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TfIIB transcription factor IIB [ Schistocerca cancellata (South American locust) ]

Gene ID: 126191445, updated on 23-May-2024

Summary

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Gene symbol
TfIIB
Gene description
transcription factor IIB
See related
EnsemblRapid:LOC126191445
Gene type
protein coding
RefSeq status
MODEL
Organism
Schistocerca cancellata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera; Acrididea; Acridomorpha; Acridoidea; Acrididae; Cyrtacanthacridinae; Schistocerca
Orthologs
fruit fly all
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Genomic context

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See TfIIB in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
100 current iqSchCanc2.1 (GCF_023864275.1) 6 NC_064631.1 (142115495..142136943)

Chromosome 6 - NC_064631.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene sodium- and chloride-dependent glycine transporter 1-like Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene general transcription factor IIIC subunit l(2)37Cd Neighboring gene uncharacterized LOC126088198

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064631.1 Chromosome 6 Reference iqSchCanc2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor IIB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Schistocerca cancellata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iqSchCanc2.1 Primary Assembly

Genomic

  1. NC_064631.1 Reference iqSchCanc2.1 Primary Assembly

    Range
    142115495..142136943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049932323.1 → XP_049788280.1  transcription initiation factor IIB

    Related
    XP_049788280.1, XM_049932323.1
Nucleotide Protein
Heading Accession and Version

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