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Pat1 Protein interacting with APP tail-1 [ Schistocerca cancellata (South American locust) ]

Gene ID: 126191454, updated on 15-May-2024

Summary

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Gene symbol
Pat1
Gene description
Protein interacting with APP tail-1
See related
EnsemblRapid:LOC126191454
Gene type
protein coding
RefSeq status
MODEL
Organism
Schistocerca cancellata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera; Acrididea; Acridomorpha; Acridoidea; Acrididae; Cyrtacanthacridinae; Schistocerca
Orthologs
fruit fly all
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Genomic context

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See Pat1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current iqSchCanc2.1 (GCF_023864275.1) 1 NC_064626.1 (937256637..937348977, complement)

Chromosome 1 - NC_064626.1Genomic Context describing neighboring genes Neighboring gene acidic phospholipase A2 PA4-like Neighboring gene craniofacial development protein 2-like Neighboring gene transcription elongation factor Spt6 Neighboring gene RNA-binding protein 25-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064626.1 Chromosome 1 Reference iqSchCanc2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid protein-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Schistocerca cancellata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iqSchCanc2.1 Primary Assembly

Genomic

  1. NC_064626.1 Reference iqSchCanc2.1 Primary Assembly

    Range
    937256637..937348977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049932334.1 → XP_049788291.1  amyloid protein-binding protein 2

    Related
    XP_049788291.1, XM_049932334.1
Nucleotide Protein
Heading Accession and Version

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