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Spt6 transcription elongation factor Spt6 [ Schistocerca cancellata (South American locust) ]

Gene ID: 126191473, updated on 13-May-2024

Summary

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Gene symbol
Spt6
Gene description
transcription elongation factor Spt6
See related
EnsemblRapid:LOC126191473
Gene type
protein coding
RefSeq status
MODEL
Organism
Schistocerca cancellata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera; Acrididea; Acridomorpha; Acridoidea; Acrididae; Cyrtacanthacridinae; Schistocerca
Orthologs
fruit fly all
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Genomic context

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See Spt6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
30
Annotation release Status Assembly Chr Location
100 current iqSchCanc2.1 (GCF_023864275.1) 1 NC_064626.1 (937393253..937563093, complement)

Chromosome 1 - NC_064626.1Genomic Context describing neighboring genes Neighboring gene craniofacial development protein 2-like Neighboring gene Protein interacting with APP tail-1 Neighboring gene RNA-binding protein 25-like Neighboring gene craniofacial development protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064626.1 Chromosome 1 Reference iqSchCanc2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation-coupled chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor SPT6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Schistocerca cancellata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iqSchCanc2.1 Primary Assembly

Genomic

  1. NC_064626.1 Reference iqSchCanc2.1 Primary Assembly

    Range
    937393253..937563093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049932355.1 → XP_049788312.1  transcription elongation factor SPT6

    Related
    XP_049788312.1, XM_049932355.1
Nucleotide Protein
Heading Accession and Version

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