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pch2 pachytene checkpoint 2 protein [ Schistocerca cancellata (South American locust) ]

Gene ID: 126191556, updated on 23-May-2024

Summary

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Gene symbol
pch2
Gene description
pachytene checkpoint 2 protein
See related
EnsemblRapid:LOC126191556
Gene type
protein coding
RefSeq status
MODEL
Organism
Schistocerca cancellata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera; Acrididea; Acridomorpha; Acridoidea; Acrididae; Cyrtacanthacridinae; Schistocerca
Orthologs
fruit fly all
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Genomic context

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See pch2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
100 current iqSchCanc2.1 (GCF_023864275.1) 6 NC_064631.1 (562362965..562398186)

Chromosome 6 - NC_064631.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 52, riboflavin transporter, member 3-B-like Neighboring gene solute carrier family 52, riboflavin transporter, member 3-A-like Neighboring gene solute carrier family 52, riboflavin transporter, member 3-B-like Neighboring gene aminopeptidase N-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064631.1 Chromosome 6 Reference iqSchCanc2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in meiotic recombination checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pachytene checkpoint protein 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Schistocerca cancellata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iqSchCanc2.1 Primary Assembly

Genomic

  1. NC_064631.1 Reference iqSchCanc2.1 Primary Assembly

    Range
    562362965..562398186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049932469.1 → XP_049788426.1  pachytene checkpoint protein 2 homolog

    Related
    XP_049788426.1, XM_049932469.1
Nucleotide Protein
Heading Accession and Version

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