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abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) [ Dicentrarchus labrax (European seabass) ]

Gene ID: 127355731, updated on 10-Oct-2024

Summary

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Gene symbol
abcc1
Gene description
ATP binding cassette subfamily C member 1 (ABCC1 blood group)
See related
Ensembl:ENSDLAG00005007135
Gene type
protein coding
RefSeq status
MODEL
Organism
Dicentrarchus labrax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Dicentrarchus
Orthologs
human zebrafish all
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Genomic context

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See abcc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_02 current dlabrax2021 (GCF_905237075.1) Unplaced Scaffold NW_026136722.1 (21220776..21266625)

NW_026136722.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel, subfamily M, member 4a Neighboring gene uncharacterized LOC127355793 Neighboring gene uncharacterized LOC127355831 Neighboring gene germ cell nuclear acidic protein Neighboring gene uncharacterized LOC127355844 Neighboring gene SR-related CTD-associated factor 1 Neighboring gene small nuclear ribonucleoprotein 70 (U1)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026136722 Unplaced Scaffold Reference dlabrax2021 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type xenobiotic transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutathione transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xenobiotic transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multidrug resistance-associated protein 1
Names
ATP-binding cassette, sub-family C (CFTR/MRP), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905237075.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference dlabrax2021 Primary Assembly

Genomic

  1. NW_026136722.1 Reference dlabrax2021 Primary Assembly

    Range
    21220776..21266625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051386826.1 → XP_051242786.1  multidrug resistance-associated protein 1 isoform X1

  2. XM_051386827.1 → XP_051242787.1  multidrug resistance-associated protein 1 isoform X2

  3. XM_051386828.1 → XP_051242788.1  multidrug resistance-associated protein 1 isoform X3

  4. XM_051386829.1 → XP_051242789.1  multidrug resistance-associated protein 1 isoform X4

  5. XM_051386830.1 → XP_051242790.1  multidrug resistance-associated protein 1 isoform X5

    Related
    ENSDLAP00005014866.2, ENSDLAT00005016150.2

  6. XM_051386832.1 → XP_051242792.1  multidrug resistance-associated protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C4EE12
    Related
    ENSDLAP00005016250.2, ENSDLAT00005017595.2

RNA

  1. XR_007881832.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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