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Cmas cytidine monophospho-N-acetylneuraminic acid synthetase [ Mus musculus (house mouse) ]

Gene ID: 12764, updated on 2-Nov-2024

Summary

Official Symbol
Cmasprovided by MGI
Official Full Name
cytidine monophospho-N-acetylneuraminic acid synthetaseprovided by MGI
Primary source
MGI:MGI:1337124
See related
Ensembl:ENSMUSG00000030282 AllianceGenome:MGI:1337124
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CMPNeu5Ac; D6Bwg0250e
Summary
Enables N-acylneuraminate cytidylyltransferase activity. Involved in CMP-N-acetylneuraminate biosynthetic process. Is active in nucleoplasm. Is expressed in several structures, including alimentary system; genitourinary system; liver; nervous system; and sensory organ. Used to study focal segmental glomerulosclerosis. Orthologous to human CMAS (cytidine monophosphate N-acetylneuraminic acid synthetase). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in liver E14 (RPKM 52.8), liver E14.5 (RPKM 43.2) and 28 other tissues See more
Orthologs
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Genomic context

See Cmas in Genome Data Viewer
Location:
6 G2; 6 74.66 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (142702468..142721440)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (142756686..142775714)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_17709 Neighboring gene potassium inwardly-rectifying channel, subfamily J, member 8 Neighboring gene RIKEN cDNA 5330439B14 gene Neighboring gene ATP-binding cassette, sub-family C member 9 Neighboring gene STARR-seq mESC enhancer starr_17710 Neighboring gene STARR-positive B cell enhancer ABC_E10416 Neighboring gene predicted gene, 53249 Neighboring gene predicted gene, 46981 Neighboring gene sulfotransferase family 6B, member 2 Neighboring gene predicted gene 7457 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
N-acylneuraminate cytidylyltransferase
Names
CMP-N-acetylneuraminic acid synthase
CMP-N-acetylneuraminic acid synthetase
CMP-Neu5Ac synthase
CMP-NeuNAc synthase
CMP-NeuNAc synthetase
CMP-sialic acid synthetase
NP_001396504.1
NP_001396505.1
NP_034038.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001409575.1NP_001396504.1  N-acylneuraminate cytidylyltransferase isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC164104
  2. NM_001409576.1NP_001396505.1  N-acylneuraminate cytidylyltransferase isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC164104
  3. NM_009908.3NP_034038.2  N-acylneuraminate cytidylyltransferase isoform 1

    See identical proteins and their annotated locations for NP_034038.2

    Status: VALIDATED

    Source sequence(s)
    AC164104
    Consensus CDS
    CCDS20687.1
    UniProtKB/Swiss-Prot
    O88719, Q8C330, Q8K2G7, Q99KK2
    UniProtKB/TrEMBL
    A0A0R4J0B4
    Related
    ENSMUSP00000032419.9, ENSMUST00000032419.9
    Conserved Domains (2) summary
    cd02513
    Location:42257
    CMP-NeuAc_Synthase; CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety
    cl21460
    Location:268419
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RNA

  1. NR_176869.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC164104
  2. NR_176870.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC164104
  3. NR_176871.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC164104

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    142702468..142721440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)