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ANID_20006 LAGLIDADG endonuclease [ Aspergillus nidulans FGSC A4 ]

Gene ID: 12799274, updated on 7-Sep-2023

Summary

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Gene symbol
ANID_20006
Gene description
LAGLIDADG endonuclease
Locus tag
ANID_20006
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus nidulans FGSC A4 (strain: FGSC A4)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Nidulantes
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Genomic context

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See ANID_20006 in Genome Data Viewer
Sequence:
Chromosome: MT; NC_017896.1 (8336..9166)

Chromosome MT - NC_017896.1Genomic Context describing neighboring genes Neighboring gene tRNA-Asn Neighboring gene hypothetical protein Neighboring gene cytochrome b Neighboring gene tRNA-Cys Neighboring gene NADH-ubiquinone oxidoreductase subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_017896.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An allosteric-feedback mechanism for protein-assisted group I intron splicing. Caprara MG, et al. RNA, 2007 Feb. PMID 17164477, Free PMC Article
  2. Functionally distinct nucleic acid binding sites for a group I intron encoded RNA maturase/DNA homing endonuclease. Chatterjee P, et al. J Mol Biol, 2003 May 30. PMID 12758073
  3. In vitro analysis of the relationship between endonuclease and maturase activities in the bi-functional group I intron-encoded protein, I-AniI. Geese WJ, et al. Eur J Biochem, 2003 Apr. PMID 12654010
  4. A novel mechanism for protein-assisted group I intron splicing. Solem A, et al. RNA, 2002 Apr. PMID 11991637, Free PMC Article
  5. A comprehensive characterization of a group IB intron and its encoded maturase reveals that protein-assisted splicing requires an almost intact intron RNA. Geese WJ, et al. J Mol Biol, 2001 May 11. PMID 11350164

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by AspGD

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA nuclease activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables RNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within Group I intron splicing IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within RNA folding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
LAGLIDADG endonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_017896.1 Reference assembly

    Range
    8336..9166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_006303572.1 LAGLIDADG endonuclease (mitochondrion) [Aspergillus nidulans FGSC A4]

    See identical proteins and their annotated locations for YP_006303572.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H9D0N7
    Conserved Domains (1) summary
    pfam00961
    Location:31 → 127
    LAGLIDADG_1; LAGLIDADG endonuclease
Nucleotide Protein
Heading Accession and Version

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