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Ablim1 actin binding LIM protein 1 [ Peromyscus californicus insignis ]

Gene ID: 128125779, updated on 25-Mar-2024

Summary

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Gene symbol
Ablim1
Gene description
actin binding LIM protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus californicus insignis (sub-species: insignis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM782708v3 (GCF_007827085.1) Unplaced Scaffold NW_026294562.1 (4248798..4550252)

NW_026294562.1Genomic Context describing neighboring genes Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene uncharacterized LOC128095289 Neighboring gene FHF complex subunit HOOK interacting protein 2A Neighboring gene 60S ribosomal protein L5-like Neighboring gene actin filament associated protein 1 like 2 Neighboring gene von Willebrand factor A domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294562 Unplaced Scaffold Reference ASM782708v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-binding LIM protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_007827085.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM782708v3

Genomic

  1. NW_026294562.1 Reference ASM782708v3

    Range
    4248798..4550252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052763481.1 → XP_052619441.1  actin-binding LIM protein 1 isoform X2

  2. XM_052763488.1 → XP_052619448.1  actin-binding LIM protein 1 isoform X9

  3. XM_052763483.1 → XP_052619443.1  actin-binding LIM protein 1 isoform X4

  4. XM_052763480.1 → XP_052619440.1  actin-binding LIM protein 1 isoform X1

  5. XM_052763485.1 → XP_052619445.1  actin-binding LIM protein 1 isoform X6

  6. XM_052763484.1 → XP_052619444.1  actin-binding LIM protein 1 isoform X5

  7. XM_052763487.1 → XP_052619447.1  actin-binding LIM protein 1 isoform X8

  8. XM_052763486.1 → XP_052619446.1  actin-binding LIM protein 1 isoform X7

  9. XM_052763482.1 → XP_052619442.1  actin-binding LIM protein 1 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

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