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LOC128196784 signal recognition particle 9 kDa protein-like [ Vigna angularis (adzuki bean) ]

Gene ID: 128196784, updated on 10-Oct-2024

Summary

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Gene symbol
LOC128196784
Gene description
signal recognition particle 9 kDa protein-like
Locus tag
HKW66_Vig0227080
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna angularis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC128196784 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2022_12 current ASM1680809v1 (GCF_016808095.1) 5 NC_068974.1 (459470..467946, complement)

Chromosome 5 - NC_068974.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128196783 Neighboring gene signal recognition particle 9 kDa protein-like Neighboring gene uncharacterized LOC128196785 Neighboring gene uncharacterized LOC128196494

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068974.1 Chromosome 5 Reference ASM1680809v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle 9 kDa protein-like
Names
Signal recognition particle protein
Vigan.UMG072500

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016808095.1-RS_2023_1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1680809v1 Primary Assembly

Genomic

  1. NC_068974.1 Reference ASM1680809v1 Primary Assembly

    Range
    459470..467946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052878412.1 → XP_052734372.1  signal recognition particle 9 kDa protein-like

    UniProtKB/TrEMBL
    A0A0S3TDU8, A0A8T0KD59

  2. XM_052878415.1 → XP_052734375.1  signal recognition particle 9 kDa protein-like

    UniProtKB/TrEMBL
    A0A0S3TDU8, A0A8T0KD59

  3. XM_052878414.1 → XP_052734374.1  signal recognition particle 9 kDa protein-like

    UniProtKB/TrEMBL
    A0A0S3TDU8, A0A8T0KD59

  4. XM_052878413.1 → XP_052734373.1  signal recognition particle 9 kDa protein-like

    UniProtKB/TrEMBL
    A0A0S3TDU8, A0A8T0KD59
Nucleotide Protein
Heading Accession and Version

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