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LOC128212480 nuclear pore complex protein Nup107-like [ Mya arenaria ]

Gene ID: 128212480, updated on 23-Nov-2023

Summary

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Gene symbol
LOC128212480
Gene description
nuclear pore complex protein Nup107-like
Locus tag
MAR_015060
See related
EnsemblRapid:LOC128212480
Gene type
protein coding
RefSeq status
MODEL
Organism
Mya arenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Myida; Myoidea; Myidae; Mya
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Genomic context

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See LOC128212480 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM2691426v1 (GCF_026914265.1) 12 NC_069133.1 (12229090..12250198)

Chromosome 12 - NC_069133.1Genomic Context describing neighboring genes Neighboring gene protein FAM184A-like Neighboring gene stress-70 protein, mitochondrial-like Neighboring gene uncharacterized LOC128210255 Neighboring gene uncharacterized LOC128210256

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069133.1 Chromosome 12 Reference ASM2691426v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative phylotranscriptomics reveals putative sex differentiating genes across eight diverse bivalve species. Evensen KG, et al. Comp Biochem Physiol Part D Genomics Proteomics, 2022 Mar. PMID 34952324
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup107-like
Names
NU107-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026914265.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2691426v1 Primary Assembly

Genomic

  1. NC_069133.1 Reference ASM2691426v1 Primary Assembly

    Range
    12229090..12250198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052917964.1 → XP_052773924.1  nuclear pore complex protein Nup107-like

    Related
    XP_052773924.1, XM_052917964.1
Nucleotide Protein
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