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Cort cortistatin [ Mus musculus (house mouse) ]

Gene ID: 12854, updated on 28-Oct-2024

Summary

Official Symbol
Cortprovided by MGI
Official Full Name
cortistatinprovided by MGI
Primary source
MGI:MGI:109538
See related
Ensembl:ENSMUSG00000028971 AllianceGenome:MGI:109538
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CST; PCST
Summary
This gene encodes a member of the somatostatin family of multifunctional peptides attributed with neurohormone, neurotransmitter/modulator and autocrine/paracrine actions. The encoded preproprotein undergoes proteolytic processing to generate a mature functional peptide that can bind to somatostatin receptors. Mice lacking the encoded protein exhibit elevated levels of growth hormone in the plasma without major changes in somatic growth and have exacerbated nociceptive responses to neuropathic and inflammatory pain sensitization. Transgenic mice overexpressing the encoded protein in neurons do not express long-term potentiation in the dentate gyrus and exhibit deficits in synaptic plasticity and learning. [provided by RefSeq, Nov 2015]
Expression
Biased expression in frontal lobe adult (RPKM 2.9), cortex adult (RPKM 2.4) and 12 other tissues See more
Orthologs
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Genomic context

See Cort in Genome Data Viewer
Location:
4 E2; 4 78.89 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (149209491..149211132, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (149125034..149126763, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 14 Neighboring gene STARR-positive B cell enhancer ABC_E9626 Neighboring gene predicted gene, 46722 Neighboring gene STARR-seq mESC enhancer starr_12102 Neighboring gene DNA fragmentation factor, alpha subunit Neighboring gene STARR-positive B cell enhancer ABC_E4730 Neighboring gene STARR-positive B cell enhancer ABC_E11279 Neighboring gene centromere protein S Neighboring gene ribosomal protein SA, pseudogene 12

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables G protein-coupled receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide hormone activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001420759.1NP_001407688.1  cortistatin isoform 2 preproprotein

    Status: VALIDATED

    Source sequence(s)
    AL731655
  2. NM_007745.5NP_031771.1  cortistatin isoform 1 preproprotein

    See identical proteins and their annotated locations for NP_031771.1

    Status: VALIDATED

    Source sequence(s)
    AL731655
    Consensus CDS
    CCDS18953.1
    UniProtKB/Swiss-Prot
    A2AH76, P56469, Q9R1P8
    Related
    ENSMUSP00000030815.3, ENSMUST00000030815.3
    Conserved Domains (1) summary
    pfam03002
    Location:91108
    Somatostatin; Somatostatin/Cortistatin family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    149209491..149211132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)